BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023G06LP1|AL428108
(990 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1174 1928 0.0
>3x_Contig1174
Length = 6106
Score = 1928 bits (972), Expect = 0.0
Identities = 986/990 (99%), Gaps = 1/990 (0%)
Strand = Plus / Plus
Query: 1 atcgctatgcctttctttgtatcaagcaagccaatttatgaagatatcggcggggagtct 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 563 atcgctatgcctttctttgtatcaagcaagcaaatttatgaagatatcggcggggagtct 622
Query: 61 gtcttcagggagaagatattgaataaagtactaaaattcgatttgatgtcgccgcttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gtcttcagggagaagatattgaataaagtactaaaattcgatttgatgtcgccgcttgag 682
Query: 121 attatccaaacattgagcggtacaaatgtggtaaaatatggagcaataaaggattttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 attatccaaacattgagcggtacaaatgtggtaaaatatggagcaataaaggattttttg 742
Query: 181 gtagattatttgaagggcgagaacgctgagattcaaaagaatgagttattggtaaaatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gtagattatttgaagggcgagaacgctgagattcaaaagaatgagttattggtaaaatca 802
Query: 241 tacgagaaagagcttgacctaaaagtttcaaagcttaaagaagccttggccattgaatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tacgagaaagagcttgacctaaaagtttcaaagcttaaagaagccttggccattgaatct 862
Query: 301 cccttgcaagttcaggttaaaaagagactttgcgatgcgtgcaacatcttattggaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 cccttgcaagttcaggttaaaaagagactttgcgatgcgtgcaacatcttattggaattt 922
Query: 361 ccaatggtattcttcaaatgtggtcatctataccatcaacgctgtttgaatgaggaaacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 ccaatggtattcttcaaatgtggtcatctataccatcaacgctgtttgaatgaggaaacg 982
Query: 421 gattcagatttactctatagttgtcctcaatgtgttgtcgagacagaatcggcgaagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 gattcagatttactctatagttgtcctcaatgtgttgtcgagacagaatcggcgaagaaa 1042
Query: 481 actatggccacatataaaaattcctcacagaacgctaacttactaagagccgcactttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 actatggccacatataaaaattcctcacagaacgctaacttactaagagccgcactttct 1102
Query: 541 gatttagatgccaaggaagacagatttgccatcatatctgaattcatcggtaaaggtggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 gatttagatgccaaggaagacagatttgccatcatatctgaattcatcggtaaaggtggc 1162
Query: 601 ctagatgatccggagtgtattattactcaaggataacaaatcacgtgatcgaaaatcgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 ctagatgatccggagtgtattattactcaaggataacaaatcacgtgatcgaaaatcgag 1222
Query: 661 acatctagtttttccgctgtcatctaactgttctgctaactgtaatataacaaacgtttc 720
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1223 acatctagtttttccgctgtcatctaactgttttgctaactgtaatataacaaacgtttc 1282
Query: 721 atacatgattcatatatgaaacatgactacaactgcgacaaaatgatataaaaggaccac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 atacatgattcatatatgaaacatgactacaactgcgacaaaatgatataaaaggaccac 1342
Query: 781 aactcaagtccagtaggtttcagtaccttctctataagctgtggttgtttttttcctcct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 aactcaagtccagtaggtttcagtaccttctctataagctgtggttgtttttttcctcct 1402
Query: 841 tcactgaatagtgttatagaactacccaaactcctattgttaatacgagcaaacgatgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 tcactgaatagtgttatagaactacccaaactcctattgttaatacgagcaaacgatgat 1462
Query: 901 aaagtcaagatactccacgtacttattaaattatccgtcaaataactccgttactccaat 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 aaagtcaagatactccacgtacttattaaattatccgtcaaataactccgttactccaa- 1521
Query: 961 taagaacttgtcgagaggrcaaatatgtgc 990
|||||||||||||||||| |||||||||||
Sbjct: 1522 taagaacttgtcgagaggacaaatatgtgc 1551
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7276
Number of Sequences: 1807
Number of extensions: 7276
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 990
length of database: 10,358,551
effective HSP length: 16
effective length of query: 974
effective length of database: 10,329,639
effective search space: 10061068386
effective search space used: 10061068386
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)